Question: how to process vcf files for GWAS analysis
28 days ago by
Manoj • 80
Manoj • 80 wrote:
Hi, I have got vcf files from GATK. I have a total of 195 vcf files. Please let me know how to proceed for GWAS analysis. I have a phenotype file. Please suggest any method or workflow.
Phenotype file example:
Samples gender status FA2001 M affected FA2002 M affected FA2003 M unaffected FA2004 F affected FA2006 F unaffected
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