Question: how to depict or draw inherited chromosome segments among individuals based on SNP genotyping data?
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gravatar for blacktomato27
5 weeks ago by
United States
blacktomato2760 wrote:

Hi to all good afternoon

I have SNP genotyping on F1 (Hybrid) and some times on parents also and format is like A/T, G/C,A/C,A/G with SNP physical positions and chromosome number. Now i would like draw which portion of genome inherited or conserved in all these individuals from their parents so that i can conclude that this particular individual is derived from pair two individuals (parents). I need to draw them like chromo painter results. are there any ideas on how can i do it? it is highly helpful by sharing tools or software or R packages useful to solve my problem. Thank you very much in advance Reards,

snp R genome • 218 views
ADD COMMENTlink modified 12 days ago by Biostar ♦♦ 20 • written 5 weeks ago by blacktomato2760
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