Question: ICD10, main ICD10 and secondary ICD10
1
gravatar for Shicheng Guo
4 weeks ago by
Shicheng Guo8.5k
Shicheng Guo8.5k wrote:

Hi All,

Who can share some experiences what's the difference between these 3 items in UKB. Which one should be used or which one is better to use?

41271   Diagnoses - ICD9    Summary Diagnoses  
41203   Diagnoses - main ICD9   Summary Diagnoses  
41205   Diagnoses - secondary ICD9  Summary Diagnoses 

Thanks.

icd9 ukb icd10 • 105 views
ADD COMMENTlink modified 4 weeks ago by Garan650 • written 4 weeks ago by Shicheng Guo8.5k
2
gravatar for Garan
4 weeks ago by
Garan650
United Kingdom
Garan650 wrote:

I think it's the main HES data that you want with 410,309 participants, which I believe is 41270 Diagnoses - ICD10 (this should be a combination of both main diagnoses 41202 and any secondary diagnoses 41204).

You can see how the data is derived for 41270 in the Related Data-fields tab for 41270

I think that the ICD-9 encoded data (41271 approx. 20,000 participants) are from the earlier Scottish data? If you look at the Notes tab for this field in the data showcase it has the following "Please note ICD-9 coded hospital inpatient data are only available for older Scottish hospital records"

It does also note that ICD-9 codes are for 20,302 participants.

from HospitalEpisodeStatistics.pdf (available through the data showcase) p.4 "All of the current UK Biobank linked English and most Welsh hospital data are coded in ICD-10 and OPCS-4. However, because the collection of Scottish data began earlier (in 1981), the earlier Scottish data (those collected prior to 1997) are coded in ICD-9 and OPCS-3, and small number of Welsh records are coded with ICD-9".

So to answer the question 41271 is the combined (main and secondary) ICD-9 diagnoses from approx. 20,000 Scottish / Welsh participants.

This does cause problems if you don't exclude particpants with ICD-9 codes from the analysis, unless you could map any ICD-9 codes you require to ICD-10.

Hope that helps

ADD COMMENTlink modified 4 weeks ago • written 4 weeks ago by Garan650
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