Question: what is the deal with bioconda?
0
gravatar for mk
5 weeks ago by
mk190
mk190 wrote:

Is there any kind of conflict-checking for this channel?

I've never had a problem installing conda packages until I tried:

conda create --name seur01 -y 

conda activate seur01 

conda install -c bioconda r-seurat

Collecting package metadata (current_repodata.json): done 
Solving environment: failed with initial frozen solve. 
Retrying with flexible solve. 
Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source. 
Collecting package metadata (repodata.json): done 
Solving environment: failed with initial frozen solve. 
Retrying with flexible solve. 
Solving environment: /  Found conflicts! 
Looking for incompatible packages.                                                              
failed                                                                

UnsatisfiableError:

And that's it! There is no more output.

conda bioconda • 177 views
ADD COMMENTlink modified 5 weeks ago by GenoMax92k • written 5 weeks ago by mk190
4
gravatar for GenoMax
5 weeks ago by
GenoMax92k
United States
GenoMax92k wrote:

Make sure the order of channels is as follows.

conda config --add channels defaults
conda config --add channels bioconda
conda config --add channels conda-forge

I don't see the problem you are getting.

ADD COMMENTlink modified 5 weeks ago • written 5 weeks ago by GenoMax92k

confirmed, thanks @genomax

ADD REPLYlink written 4 weeks ago by mk190
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