best tool to evaluate the CNV status of germline samples using 1x WGS

Question

[J.F.Jiang]

Hi all,

In order to evaluate the CNV status of samples, we performed 1x WGS as CNVSeq, together with WES.

However, we found hard to select the CNVseq tool using 1x WGS data, although most of them used window sliding to gather the CNV regions.

Any suggestions?

Thanks, Junfeng