Entering edit mode
3.9 years ago
Ric
▴
440
Hi, I have a FASTA file which contains a .
after each sequence. How is it possilble to remove the dot?
>gene39576 gene=rps16
MVKLRLKRCGRKQRAVYRIVAIDVRSRREGKDLRKVGFYDPIKNQTYLNVPAILYFLEKG
AQPTGTVQDILKKAEVFKELRPNQS.
>gene39578 gene=psbK
MLNTFSLIGICLNSTLFSSSFFFGKLPEAYAFLNPIVDIMPVIPLFFFLLAFVWQAAVSF
R.
>gene39579 gene=psbI
MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE.
>gene39580 gene=NitoCp007
MIPDVILDVKNKIKRGFPCLIFKFSYDLVYSTHLTKNKNKGFRNLKKKNQVINGKRGIRT
LGTINSYNGLAIRRFSPLSHLSQLKKIITT.
>gene39584 gene=atpA
MVTIRADEISNIIRERIEQYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT
IGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRG
EISASEFRLIESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVA
TDTILNQQGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAP
YTGAALAEYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE
RAAKLSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINV
GISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLREL
LKQSQSAPLTVEEQIMTIYTGTNGYLDSLEVGQVRKFLVELRTYLKTNKPQFQEIISSTK
TFTEEAEALLKEAIQEQTDRFILQEQA.
Thank you in advance,
I have tried both the cmd suggested above.
&
But i am still having the dots. I am adding the sequence here for you convenience (9th charecter on the stringļ¼.
Can i please get any suggestions? @pierre lindenbaum cpad0112
You can use the following: