It was my understanding that reads from 10x scRNA-seq experiments were always paired-end. I have been downloading a lot of such data and so far I have always found this to be the case. But I found something confusing in this sample:
It is a 10x sample, and yet there is only one read, no R2 at all. Am I looking at this incorrectly? If I am not, how could one analyze this sample with the missing read?
Thanks so much!!