Hi I have a project file for 2000 individuals, with SNPs from WGS. We have decided to change the sample names to a more uniform way of naming individuals from different sources.
I wish to do a quick check if there's inbuilt functions in plink or plink seq or vcftools to do this i.e. pass it a sample name remapping file to output a new set of fam ids and idv ids.
Otherwise, i might consider doing this using sqlite since there's a possibility I might have to slice the data in another way again