Visualize pileup data
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18 months ago
bsmith030465 ▴ 200

Hi,

I have a pileup file that contains the read information for overlaps on GFP data. Is there an online tool where I can upload the pileup file and the reference .fa file to visualize the data?

Or is there a program that I can download to visualize this data?

thanks!

pileup gfp • 1.1k views
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Not sure what GFP data is and what type of visualization you're after, but have you tried IGV for a start?

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5 months ago
Sehi L'Yi ▴ 30

Potentially helpful resources:

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5 months ago
atorreso ▴ 120

The list provided by Sehi L'Yi is probably the way to go, but I will also add the R package Gviz which it's also useful for figures.

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