This question might be basic but it has gotten me confused. I download single cell RNASeq data for a sample from GEO using SRAtoolkit. As you can see here, this particular sample has 4 runs. So when running STARSolo using the following command, would it be right to comma-separate the runs ?
STAR --genomeDir ~/ngs/mm10_STARSolo --readFilesIn run1_R2,run2_R2,run3_R2 run1_R1,run2_R1,run3_R1 [...other parameters...]