How to bubble in ggplot2 or other package
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11 months ago
MSRS ▴ 520

I have the data frame from indicspecise R package as below.

organisms indicator_value R_G1 p_G1 R_G2 p_G2 R_G3 p_G3 ..
A .98. 01 .05. .2. 05 .09. 02
B .98 .05 NA .1. 03 .09. 04
C .98 .02.. 02 .07 NA .2 0.02

I want to draw a bubble plot like this "https://ibb.co/Pt7CM7P". can anyone assist me. Thank you for your assistance

R ggplot2 • 333 views
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try dotplot function in clusterprofiler package (R)

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Please don't delete a question after someone spends the time to help you.

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Apology! Follow in future. Thank you

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11 months ago
zachary.wu.y ▴ 20

geom_point(aes(size = indicator_value)) will output the raw figure you want.

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