How to visulize bed6 file generated from Pureclip analysis
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3.4 years ago
Kai_Qi ▴ 130

Hello world:

I have went through a protocol for analyzing eCLIP-seq and get the final Bed6 file :https://pureclip.readthedocs.io/en/latest/PureCLIPTutorial/incorporateInput.html

I loaded the bed6 file into IGV but cannot see the peaks (there is no bam files in IGV, but previously, when I load the BED from published resources, I can see a bar representing a score in IGV without bam)

Can anyone teach me how to do visulization?

Thanks, Kai

RNA-Seq rna-seq sequencing next-gen • 592 views
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