Question: Pilon software installation
gravatar for bioramg
9 weeks ago by
bioramg0 wrote:

Hi, I am a very beginner in Bioinformatics and would like to use Pilon for genome assembly. I could not find any instructions or manual for the installation. I downloaded pilon-master and extracted. I do not know what could be the next steps to install. Could you please help me in this regard?

I am looking forward to hearing from you.

Sincerely, Raman. G.

sequencing tool assembly • 164 views
ADD COMMENTlink modified 9 weeks ago by jordi.planells330 • written 9 weeks ago by bioramg0
gravatar for jordi.planells
9 weeks ago by
jordi.planells330 wrote:

How about using conda? It is a package manager that will take care of all dependencies when installing anything.

I would recommend you to reads the docs, everything is clearly explained there. It will save you a lot of time when installing new programs.

To install pilon:

conda install -c bioconda pilon

That will do the trick.

ADD COMMENTlink written 9 weeks ago by jordi.planells330
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