Question: Package to get full Pubmed text in R
gravatar for Bioinformatician_in_trouble
7 weeks ago by

Hello, Does anyone know of any package in R that contains a function to extract full Pubmed text? I searched in RISmed, pubmed.mineR, and easyPubMed, I believe none of them can extract full text. Any leads would be highly appreciated.

pubmed data mining R • 153 views
ADD COMMENTlink modified 7 weeks ago by Jean-Karim Heriche24k • written 7 weeks ago by Bioinformatician_in_trouble30
gravatar for Jean-Karim Heriche
7 weeks ago by
EMBL Heidelberg, Germany
Jean-Karim Heriche24k wrote:

PubMed only has abstracts. Only open access articles have full text available and these are in PubMed Central. You can use the NCBI's eutils to get them or download them from their FTP site.

ADD COMMENTlink written 7 weeks ago by Jean-Karim Heriche24k
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