Find conditions where target gene is most differentially expressed (CBioPortal/TCGA)
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10 months ago
Dirk ▴ 80

I have a gene and cancer of interest (say, EGFR in non-small cell lung cancer). I would like to be able to in the CBioPortal (or TCGA) find conditions in which my gene is most over or under expressed. I have looked at querying the top 5-10 most mutated genes for that given cancer and then looking at the mRNA/mutation plots individually, but there must be a way to perform this comparison en masse, correct?

tcga cbioportal bioinformatics • 273 views
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