I'm struggling with something that I couldn't anticipate to be so hard to find. I am very new to the _E. coli_ world, having worked my whole life with plants. Hence, please don't judge if this is common knowledge.
I have a list of genes structured like this:
> head(Ctrl) Code Gene GOTerm 1 A0A385XJ53 insA9 GO:0006313 2 A5A605 ykfM GO:0006974 3 A5A615 yncL GO:0005886 ....
I would like to extract the Ensembl ID for each gene. I have the following libraries at hand:
library(biomaRt) library(org.Hs.eg.db) library(AnnotationHub) library(ensembldb)
Any quick workaround? Everything I found goes in the other direction (Ensembl to gene name) or is for Human / Mice only.