Subset vcf file by column ID in other file
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5 months ago
bio.pelayo • 0

Hi all!

I have a vcf file from exome seq (11GB). I have another file (.txt) with only one column. I want to subset the vcf with the ID that both files have in common.

SNP vcf • 198 views
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What have you tried? Read the bcftools manual, there is a command for your exact situation in there.

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