Downloading all-against-all precomputed for any number of species returns 504 Gateway Time-out
0
1
Entering edit mode
13 months ago
m3hdad ▴ 10

Orthology MAtrix algorithm is a promising approach in my current project. I would like to download all-against-all pre-computed alignments for a clade and use the standalone tool on my custom genome.

Navigating to https://omabrowser.org/oma/export/ and selecting any number of species (less than 50) returns "504 Gateway Time-out" when submitting request.

I have been trying it for a week. No luck.

oma error • 416 views
ADD COMMENT
1
Entering edit mode

Hi @m3hdad,

thanks for letting us know. We're experiencing some problems with our backend cluster. I'll let you know here once it is fixed.

Best wishes Adrian

ADD REPLY
1
Entering edit mode

Hi m3hdad,

the problem seems to be solved. I could now export again a small test set. Please let us know in case you still experience some problems. Sorry for the inconvenience this has caused.

Best wishes Adrian

ADD REPLY
0
Entering edit mode

Hey Adrian,

I confirm the issue is solved.

Thanks for your prompt respond.

ADD REPLY
1
Entering edit mode

glad to hear, you're welcome! Cheers

ADD REPLY
0
Entering edit mode

Adrian I think your email server is down (contact@omabrowser.org) I cannot get any through.

I was wondering if it is possible to download >50 mappings, I would like to export and download all-against-all for viridiplantae. It is instructed to contact administrators for such request.

ADD REPLY
1
Entering edit mode

Hi, sorry just saw your message now. I regularly receive email to contact@omabrowser.org, I think it is working. you can also send a message to me on adrian.altenhoff@inf.ethz.ch.

The reason for the limit is mostly storage requirements. So think I could also provide you with a Viridiplantae export version.

ADD REPLY

Login before adding your answer.

Traffic: 1755 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6