How to get Expect instead of Expect(n) from tbalstn
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3.3 years ago

I am hoping there is a way to get the E-values for the individual alignments of hits in different frames frames. The two hits below are of vastly different quality but are clumped together under one sum score E-value "Expect(2)". I want their individual E-values. Is there and blast output format that provides this?

 Score = 63.2 bits (152),  Expect(2) = 8e-14, Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 42/55 (76%), Gaps = 2/55 (4%)
 Frame = -1

Query  1         CHASNSSCAESTNDCSGHGSCYLKYGSGVEGTTGNCFACQCKQSIVR-NSDGTSK  54
                 C+  N +C E+TN CSGHGSCY K+GS  EG+ G+C+AC+C +++VR N DGT K
Sbjct  20356489  CYNDNRTCTEATNSCSGHGSCYRKFGS-KEGSKGDCYACKCGRTVVRTNQDGT*K  20356328


 Score = 30.0 bits (66),  Expect(2) = 8e-14, Method: Compositional matrix adjust.
 Identities = 15/27 (56%), Positives = 17/27 (63%), Gaps = 6/27 (22%)
 Frame = -3

Query  54        KTVQWGGSACQK------RDISSPFFL  74
                 KTVQWGG ACQ       R+ SSP F+
Sbjct  20356331  KTVQWGGPACQSK*KQVGRN*SSPIFM  20356251
alignment • 331 views
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