Is there any tool to discover the read structure and barcodes used in a random Illumina sequencing run directory?
I have some Illumina sequencing run directories where I don't have all the information needed to demultiplex the run.
With Illumina sequencing run I mean a directory like Data/Intensities/BaseCalls/
Instead of trying a lot of different read structures and barcodes I thought it should be possible to discover the used read structure and barcodes. This based on sequence over representation.