Annotatation for Metatranscriptomics data
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3.3 years ago
hardyjulie • 0

I am looking for the best way to annote a metatranscriptome.

I found eggNOG with emapper but it seems that others tools are only work through a web page, and I want to annotate with local tools.

I blast my sequence with Metacyc but in the output I don't get any ec-number and pathway number, so I create a script to get the information.

So if you have any tools to use in local and the results give me ec-number and pathway number to suggest me,

Thanks in advance

RNA-Seq metatranscriptome ecnumber pathwaynumber • 448 views
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