Entering edit mode
3.8 years ago
firestar
★
1.6k
I have my data as "10x" format.
barcodes.tsv
genes.tsv
matrix.mtx
How can I convert this to .cloupe format to view in the 10x loupe browser?
The .cloupe file contains additional information that is not available in those three files, so it would not be possible to convert them.
Anyone knows if something has happened here and made it possible somehow?
I would like to exclude features that are present in < 3 cells, this is possible in Seurat but not in Loupe browser. Does anyone know how to or if it is possible?
best Jonas
This was not an answer and should not have been added as one. I've moved it to a comment - please be more careful in the future.