Entering edit mode
3.2 years ago
harry
▴
30
Hi everyone, I have these types of fastq ids they are separated by a comma and I want to extract fastq reads from my fastq file. So how can I extract the reads from these multiple fastq ids in a single command?
A00868:56:HK2YWDRXX:1:2126:26359:7373,A00868:56:HK2YWDRXX:1:2165:32000:26349,A00868:56:HK2YWDRXX:1:2217:17598:15530,A00868:56:HK2YWDRXX:1:2273:5810:32565,A00868:56:HK2YWDRXX:1:2278:4408:25661,A00868:56:HK2YWDRXX:2:2146:28664:10708,A00868:56:HK2YWDRXX:2:2150:31665:31657,A00868:56:HK2YWDRXX:2:2167:31783:35900,A00868:56:HK2YWDRXX:2:2207:27995:9236,A00868:56:HK2YWDRXX:2:2218:2094:17644,A00868:56:HK2YWDRXX:2:2226:13829:35117,A00868:56:HK2YWDRXX:2:2248:4010:35243,A00868:56:HK2YWDRXX:2:2250:9046:25958,A00868:56:HK2YWDRXX:2:2266:14018:5916,A00868:56:HK2YWDRXX:2:2268:14181:27680,A00868:56:HK2YWDRXX:1:2124:11198:5165,A00868:56:HK2YWDRXX:1:2130:17671:22764,A00868:56:HK2YWDRXX:1:2132:28637:10755,A00868:56:HK2YWDRXX:1:2136:19190:5791,A00868:56:HK2YWDRXX:1:2157:31774:28557,A00868:56:HK2YWDRXX:1:2166:31566:12226,A00868:56:HK2YWDRXX:1:2233:32642:27899,A00868:56:HK2YWDRXX:1:2238:14561:35978,A00868:56:HK2YWDRXX:1:2246:25138:18161,A00868:56:HK2YWDRXX:1:2268:21585:35524,A00868:56:HK2YWDRXX:2:2102:14443:26757,A00868:56:HK2YWDRXX:2:2106:11903:13839,A00868:56:HK2YWDRXX:2:2109:20410:31704,A00868:56:HK2YWDRXX:2:2114:12264:36605,A00868:56:HK2YWDRXX:2:2140:9146:5901,A00868:56:HK2YWDRXX:2:2142:6623:21292,A00868:56:HK2YWDRXX:2:2143:21296:32800,A00868:56:HK2YWDRXX:2:2162:19868:17675,A00868:56:HK2YWDRXX:2:2162:7753:20275,A00868:56:HK2YWDRXX:2:2166:12545:10066,A00868:56:HK2YWDRXX:2:2230:4924:9799,A00868:56:HK2YWDRXX:2:2240:7410:3458,A00868:56:HK2YWDRXX:2:2260:28058:28291,A00868:56:HK2YWDRXX:2:2272:8250:9330
Thanks in advance