Question: RMA normalization for integration of RNA-Seq and microarray expression data?
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gravatar for jariani.abbas
15 days ago by
jariani.abbas0 wrote:

Hi,

I have collected a few hundred expression datasets from the same tissue type, from different platforms. Now I am trying to integrate them. My first thought for normalizing them in a manner that they could be compared, was using z-scores, but I wonder can RMA be used here? Or maybe first RMA for microarray data, and then z-scores?

ADD COMMENTlink written 15 days ago by jariani.abbas0

May I ask why you do that and what the final analysis goal is? Please add some details.

ADD REPLYlink written 15 days ago by ATpoint44k
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