Entering edit mode
3.3 years ago
bio.pelayo
•
0
Hi all!
This is just a comment to debate. Are there any criteria to decide a threshold to filter samples based on HsMetrics from Picard tools? Data came from Whole Exome Seq. How and why we could establish a threshold? The variables are:
% of SELECTED BASES
% of TARGET BASES AT 30X
MEAN TARGET COVERAGE
Thank you all!!
Papers/Literature will be highly appreciated
