rMATS reading only part of gtf issue
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4 months ago
valopes ▴ 30

Hi all,

rMATs gives me only few events (for SE and MXE) or non (for A3SS, A5SS, and RI).

My gtf file looks fine! And, when I run rMATs with another species data, which means another gtf file, it works pretty well.

I already compared the gtf file with the one (other species), and it is the same.

I have no idea of what is happening! Could anyone please help me here?

Valeria

rna-seq • 112 views
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