For my project, I'm working with the transcriptome of a non-model organism, which has an incomplete and in many cases incorrect reference annotation. As such, I have to manually inspect the gene models, and compare them with assembled transcripts, long reads alignment, etc. I've using Jbrowser for the last 2 months, however, this software crashes every time I try to change scaffold or even if I load 4 or 5 tracks. This makes my job much less productive.
Does anyone have experience with this kind of problem, and as found a workaround, solution? (i.e using another more optimized genome browser?).