How to investigate population structure
0
0
Entering edit mode
3.2 years ago
Kumar ▴ 170

Hi,

I have 90 VCFs files. Now, I am looking to calculate population structure using fastSTRUCTURE. enter link description here Please suggest how to prepare input file for fastSTRUCTURE. Do I need to merge all VCFs and should I use PLINK to generate .bed file. I am new in this analysis. I would appreciate your suggestions.

GWAS VCFs genome Assembly • 667 views
ADD COMMENT

Login before adding your answer.

Traffic: 1842 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6