Question

compare two assembly genomes

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2.3 years ago

gallinaro.martina ▴ 10

Hi everybody! I wold like to compare two assembled genomes, in order to find common regions and regions private to each assembly. Anyone has some advice on how I can compare the two assembled genomes? Which software I can use?

thank you all

assembly pangenome • 617 views

ADD COMMENT • link updated 2.3 years ago by MSRS ▴ 580 • written 2.3 years ago by gallinaro.martina ▴ 10

score 0 · Answer 1 · 2021-02-18

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2.3 years ago

MSRS ▴ 580

BPGA is a good option to find out the bacterial genomic comparison. In this regard, the genebank file format needed.

ADD COMMENT • link 2.3 years ago by MSRS ▴ 580