Entering edit mode
3.2 years ago
Laven9
•
0
I am trying to use "QuSAGE" for enrichment analysis. Thus my seurat object needs to be transformed into ExpressingSet, and I use "SeuratToExpressionSet". But it went wrong when running "SeuratToExpressionSet":
Calculating gene-by-gene comparisons...Error in calcIndividualExpressions(eset.2, eset.1, paired = paired, min.variance.factor = min.variance.factor) :
Input Matrices need to be matrices...
What does the difference of "Matrices" and "matrices"?
What is the output of
class(exprs(YourExpressionSet))?it shows [1] "matrix" And I am trying another package named "VisCello"