error when running "SeuratToExpressionSet"
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9 months ago
Laven9 • 0

I am trying to use "QuSAGE" for enrichment analysis. Thus my seurat object needs to be transformed into ExpressingSet, and I use "SeuratToExpressionSet". But it went wrong when running "SeuratToExpressionSet":

 Calculating gene-by-gene comparisons...Error in calcIndividualExpressions(eset.2, eset.1, paired = paired, min.variance.factor = min.variance.factor) : 
  Input Matrices need to be matrices...

What does the difference of "Matrices" and "matrices"?

SeuratToExpressionSet Seurat • 317 views
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What is the output of class(exprs(YourExpressionSet))?

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it shows [1] "matrix" And I am trying another package named "VisCello"

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