Getting 0 bytes or 1 line from galaxy
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3.2 years ago

Hi,

I have an existing dataset from nanopore run in fast5 format. I'm using GALAXY to convert it into fastq format. The tools which I've trialled from the tools list are : 1) extract fastq in tabular format from a set of fast5 files and 2) extract read in fasta or fastq format from nanopore files.

I got either 1 line or 0 bytes from these runs,,,no output.

Does anyone has any idea why? or which step did i miss or input the wrong thing?

Thank you.

sequence • 642 views
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galaxy outputs the logs, for each job. Look at the logs.

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Hi,

I'll have a look at it.

Thank you.

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Galaxy related questions are best posted on their help forum: https://help.galaxyproject.org/

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Hi,

Noted!

Thank you!

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