I was wondering if anyone knows how to bioinformatically get fastqID with mutations? I want to extract the info that was displayed in Genome browser, fastqID that has SNP compared to reference.
Thanks for the help!
something like this
Do you want to do that programmatically or just for a few ID's?
Programmatically. I just need the readname and the nucleotide that it is calling at a particular coordinate.
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