How to save DEXSeq result to a .csv file ?
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Entering edit mode
5 weeks ago
Aynur ▴ 40

Hello, I am doing alternative exon usage analysis using DEXSeq and following this documentation DEXSeq Documentation

After testing the result, how do I save me results as a .csv file ?

dxd <- estimateDispersions( dxd  )       dxd <- testForDEU( dxd     dxr <- DEXSeqResults( dxd )


Following the documentation, my code worked, but I do not know how to save the result as a .csv file. I also wanna obtain log2fc, how can I do it ? I searched a lot, but could not find an answer to my question. I appreciate your kind help.

Thank you very much for helping.

R RNA-Seq • 108 views
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29 days ago

I ran write.csv(dxr, "path/filename.csv", row.names = FALSE), then I got my file which included log2fc data.

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Thanks for your help. I appreciate.