Is There A Way To See An Alignment In A Text File?
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12.0 years ago
diltsjeri ▴ 470

I know I can view a BAM in IGV, but I'm interested in working with a text file. Is there a way to see an alignment in a text file?

Thanks!

alignment • 4.7k views
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Thanks. I will give it a try.

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I second this. For viewing alignments quickly and simply, samtools tview provides everything you need.

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