How to get `assembly-stats` command?

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3.1 years ago

seda ▴ 10

I did sudo apt-get install sga for assembly-stats , after installation it typed assembly-stats: command not found . What should I do to get assembly-stats ? Ps. I run Ubuntu app on Windows using the new Windows Subsystem for Linux that comes with Windows 10.

ubuntu stats assembly-stats assembly sequencing • 1.4k views

ADD COMMENT • link updated 3.1 years ago by lieven.sterck 15k • written 3.1 years ago by seda ▴ 10

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without knowing the details:

you need to either add this assembly-stats to your $PATH or call it using the whole path to the location where you installed it

ADD REPLY • link 3.1 years ago by lieven.sterck 15k

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Usually neither of those is necessary when installing via apt-get. I think it is more likely that sourcing the .rc-file plus rehash is needed. Or simply open a new terminal and try the same command again.

ADD REPLY • link 3.1 years ago by Mensur Dlakic ★ 27k

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