DESeq2 assay weights usage
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7 months ago

I am using the ZINB-WAVE tutorial as mentioned here to perform single cell analysis: https://github.com/mikelove/zinbwave-deseq2/blob/master/zinbwave-deseq2.knit.md

I could not find any documentation indicating how the weights generated by ZINB-WAVE are actually used in DESeq2. (I am interested in the model used). Can someone explain this to me or point me to the right literature?

Any help is appreciated. Thanks!

deseq zinb-wave RNA-Seq rna-seq deseq2 • 226 views
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