Bigbedsummary Usage

Question

[GPR]

Hello, I am having trouble with runing biBedSummary. Usage is: bigBedSummary .bb file Chrom start end dataPoints I input bigBedSummary my.bb but Chrom1 start= end=* dataPoints=1 (default) I get back the message that start, end and dataPoints are not valid arguments. Any help? Thanks.

Answer 1

[Pierre Lindenbaum]

for chr1:1-100000, try

bigBedSummary file.bb chr1 1  100000 1