GWAS LocusZoom Plot from .CSV
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10 months ago
abyousaf • 0

I have GWAS summary stats in the form of a .csv file. I generated the summary stats (ie. Performed association analysis) from the R package SAIGEgds.

I now want to create a LocusZoom plot. How can I use the .csv GWAS summary stats to do this? I was going to use LocusZoom.org

The .csv has chrom pos rs.id pval beta SE ... all the things necessary.

Thanks

gwas plotting • 211 views
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