I need to visualize the correlation in better way
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3.1 years ago
mrashad ▴ 80

Dear all,

I need to visualize the correlation between some different features in a way better than corrplot. I tried the plotVar with the pca object, it works but all features used as 1 block or colored with only one color no options to color each feature with different color like: https://ibb.co/88YmLTq

enter image description here

Is there any way to make them in different colors? Or is there any library can be used for visualize the correlation in a form of correlation circle plot or any plot other than corrplot?

I just need an informative plot easily to interpret the results through it. Example for the data:

https://ibb.co/Dp9G7kT

enter image description here

Here for example, I need to visualize RNA and cytokines but with different colors

multi-omics • 856 views
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I recently posted a script that plots correlations in different colors. It is easy to customize using different matplotlib's color maps.

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3.1 years ago
Zhilong Jia ★ 2.2k

Correlation with a cut-off could be represented in a network by Cytoscape. like

enter image description here

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