How Could I Find The Software For "Divide And Conquer" Approach For Sequence Assembly?

Question

[Farid De La Ossa]

Hi everybody! Could any of you tell me how could I find software in internet like "Divide and Conquer" in order to put together oligonucleotide sequences. Feel free to contact me whenever you want. Best regards,

FARID DE LA OSSA

[Giovanni M Dall'Olio]

"Divide and Conquer" is a programming paradigm, an approach to solve a programming problem, and not a software. Moreover, it is not clear at all what you mean with 'put together oligonucleotide sequences'. Please restate your question.

[Lars Juhl Jensen]

Any particular reason why the software must use a divide-and-conquer strategy? People here might be able to better help you if you describe what it is you are trying to accomplish.

[Thaman]

You mean software? or package specific for python, perl, c, c++, java?

[Giovanni M Dall'Olio]

don't put your mail address here: it attracts spammers to this site and in any case, you should not continue conversations on private.

Answer 1

[Pierre Lindenbaum]

via pubmed: http://www.ncbi.nlm.nih.gov/pubmed/12499289

Bioinformatics. 2003 Jan;19(1):22-9.

A divide-and-conquer approach to fragment assembly.

Otu HH, Sayood K.

Available on request from the authors.