Question: Downloading Solid Accuracy Enhancement Tool
1
gravatar for lin.barnum
7.0 years ago by
lin.barnum230
lin.barnum230 wrote:

Where can I download the SOLiD accuracy enhancement tool? Apparently the official link at solidsoftwaretools.com is no longer active.

solid • 2.6k views
ADD COMMENTlink modified 4.8 years ago by Antonio R. Franco4.1k • written 7.0 years ago by lin.barnum230
3
gravatar for Istvan Albert
7.0 years ago by
Istvan Albert ♦♦ 80k
University Park, USA
Istvan Albert ♦♦ 80k wrote:

That usually means that the tool is neither supported nor is believed to be of any use anymore.

Or perhaps it means that ABI wants you to use their LifeScope software.

That being said we do have a 64bit linux version on our system and you might give it a try if you want to

http://bcc.bx.psu.edu/download/saet.2.2/

ADD COMMENTlink modified 7.0 years ago • written 7.0 years ago by Istvan Albert ♦♦ 80k

The link is dead. Could you share it again? I can find it in Lifescope package but I hope to get the source code, understand it and make some adaptation for my data. I found version 3.0.3 from here: http://torrentcircuit.iontorrent.com/warehouse/download/offlineinstaller/30 (requires registration)

ADD REPLYlink modified 5.2 years ago • written 5.2 years ago by biocyberman770

The link should work now. It is a binary though, so I don't know how much help is it going to be.

ADD REPLYlink written 5.2 years ago by Istvan Albert ♦♦ 80k
0
gravatar for Antonio R. Franco
4.8 years ago by
Spain. Universidad de Córdoba
Antonio R. Franco4.1k wrote:

You cannot believe how much complicated is turning my colleague's project done on SOLiD. I promised him with same help, but almost all repositories I visited to get tools for SOLiD are not longer available or are empty. Even the company's web pages

The http://bcc.bx.psu.edu/download/saet.2.2/ contains a pdf file with instructions, and a file named saet_mp file and cannot figure out its content. It is not a zip, tar, gz  or any kind of compressed file..

SAET 3 seem to be addressed for ion torrent data

Can anybody send me the sata.2.2.zip file to arfranco at uco.es ?

ADD COMMENTlink written 4.8 years ago by Antonio R. Franco4.1k

That file is an executable binary linux version. Later I have collected some of the tools that we still had to :

Solid Software Tools: Denovo Assembly/Xsq Tools Pipeline Mirrored At Biostar

 

ADD REPLYlink written 4.8 years ago by Istvan Albert ♦♦ 80k

and indeed SOLiD data analysis is always far more difficult

ADD REPLYlink written 4.8 years ago by Istvan Albert ♦♦ 80k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1223 users visited in the last hour