Question: Tools For Predicting Mirna Promoter Regions
4
gravatar for Samimirza
7.3 years ago by
Samimirza60
Samimirza60 wrote:

Is there any website or online software or standalone tool to predict the binding site of a promoter(region) of MiRNA precursor sequences?

prediction promoter mirna • 6.1k views
ADD COMMENTlink modified 7 weeks ago by Biostar ♦♦ 20 • written 7.3 years ago by Samimirza60
0
gravatar for saumya7392
5.6 years ago by
saumya73920
India
saumya73920 wrote:

I think this website can help: http://jaspar.genereg.net/

ADD COMMENTlink written 5.6 years ago by saumya73920
0
gravatar for eddie.im
5.6 years ago by
eddie.im130
Brazil
eddie.im130 wrote:

I dont't know about softwares to predict promoter regions of miRNA, as far as i know those are very specie specifc and usually won't perform very well. The most common aproach is to predict the miRNA sequences itself and then use a software like BPROM (http://linux1.softberry.com/berry.phtml?topic=bprom&group=help&subgroup=gfindb) to check for promoter regions upstream of the predicted sequences.

ADD COMMENTlink written 5.6 years ago by eddie.im130
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