Question: Visualization Of Cnvs
1
gravatar for pashadag
6.5 years ago by
pashadag10
pashadag10 wrote:

I am trying to generate a figure like the one in Panel B: here: http://www.pnas.org/content/104/50/20007/F2.large.jpg

Does anyone know how this type of figure can be generated?

visualization • 1.2k views
ADD COMMENTlink written 6.5 years ago by pashadag10

Could you give us a little more information? Without any reference, figure text, or key, I'm not 100% sure what this figure is showing.

ADD REPLYlink modified 6.5 years ago • written 6.5 years ago by Josh Herr5.6k
2
gravatar for arno.guille
6.5 years ago by
arno.guille400
France
arno.guille400 wrote:

This type of figure is a GISTIC (Genomic Identification of Significant Target In Cancer) result. http://www.broadinstitute.org/cgi-bin/cancer/publications/pub_paper.cgi?mode=view&paper_id=162

the GISTIC analysis is available on GenePattern analysis platform. http://genepattern.broadinstitute.org/gp/pages/login.jsf

ADD COMMENTlink written 6.5 years ago by arno.guille400
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