Question

Convert Vcf To Hapmap Genotype Format

2

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11.5 years ago

14134125465346445 ★ 3.6k

Is there any tool somewhere to convert genotype data from VCF format to the HapMap genotype format?

genomics vcf • 10.0k views

ADD COMMENT • link updated 11.5 years ago by VS ▴ 730 • written 11.5 years ago by 14134125465346445 ★ 3.6k

score 6 · Answer 1 · 2012-10-05

6

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11.5 years ago

VS ▴ 730

vcftools has options to convert to other file formats including to hapmap plink format (use option --plink) .

ADD COMMENT • link 11.5 years ago by VS ▴ 730