Question: How To Search The Dbsnp Database By A Protein Domain?
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gravatar for sagzzn872
7.6 years ago by
sagzzn8720
sagzzn8720 wrote:

How can I search SNP by domain, SNP@domain seems nor working at the moment. I have to search SNPs for a specific protein domain and to check if reported mutation are within the specified domain?

domain database protein snp • 2.0k views
ADD COMMENTlink modified 7.6 years ago • written 7.6 years ago by sagzzn8720
1

It has been a while since I searched dbSNP, but I cannot remember having seen such option. Couldn't you locate the coordinates of the domains in question and then search dbSNP by coordinates?

ADD REPLYlink modified 7.6 years ago • written 7.6 years ago by Michael Dondrup47k

I have only list of genes which are found in SH2 domain, where mutation are know to occur, Now I have to find other proteins in dbSNP that have mutations in their SH2 domains. ?

ADD REPLYlink written 7.6 years ago by sagzzn8720
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