Question

Is There Big Difference Of Using -G Annotation Or Not In Tophat

0

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11.3 years ago

camelbbs ▴ 710

Hi,

Does anyone try using -G or no -G in tophat mapping. Any effection to the result?

thanks,

Che

tophat • 1.5k views

ADD COMMENT • link updated 11.3 years ago by biorepine ★ 1.5k • written 11.3 years ago by camelbbs ▴ 710

score 1 · Answer 1 · 2013-01-04

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11.3 years ago

Raygozak ★ 1.4k

I would believe the annotation provides more information about exon boundaries and would help in detecting junctions more accurately.

ADD COMMENT • link 11.3 years ago by Raygozak ★ 1.4k