Question: Corresponding Position In Mauve Alignment
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gravatar for Raygozak
6.5 years ago by
Raygozak1.3k
State College, PA, Penn State
Raygozak1.3k wrote:

Hi, i have a mauve alignment of two sequences and there are insertions and deletions between them, is there some way to compute what is the corresponding position of a locus of a sequence in the other given the alignment? i tried doing this in the UI but couldn't, perhaps someone else has done it already.

alignment • 1.7k views
ADD COMMENTlink modified 6.5 years ago • written 6.5 years ago by Raygozak1.3k

I don't know if you've already found the solution, if not, have you looked at the backbone file? It gives the full details about the blocks (co-ordinates) and the order corresponds to the input order.

ADD REPLYlink written 6.3 years ago by arnstrm1.7k
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