Tool: Deindexer - A Standalone Demultiplexing Tool For Illumina Platform
2
gravatar for jingtao09
4.7 years ago by
jingtao09110
jingtao09110 wrote:

deindexer

A Standalone Demultiplexing Tool for Illumina Platform

Features

  1. No need to edit SampleSheet.csv files

  2. Support your own barcode library

  3. Support many mismatches on barcode[s] (Currently Illumina only allows 1 mismatch)

  4. Easy to use:

    support single barcode to dual barcode or multiple barcodes protocol [even it has not exist yet]

  5. Fast: est. 4 million reads per minute

    One hiseq lane dual indexes takes 30 mins
    

    One non-hiseq lane takes 4 min or less using 400 barcodes.

  6. Grouping output files:

    customize the output layout within the config file

Project location: https://github.com/ws6/deindexer

illumina tool • 4.8k views
ADD COMMENTlink modified 4.7 years ago • written 4.7 years ago by jingtao09110

Does it accept variable-length barcodes?

ADD REPLYlink written 2.7 years ago by Yannick Wurm2.2k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 967 users visited in the last hour