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11.2 years ago
dbolser.ebi
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How can I query all variations from dbSNP within a specific species, family, domain, etc.?
How can I query all variations from dbSNP within a specific species, family, domain, etc.?
from http://eutils.ncbi.nlm.nih.gov/entrez/eutils/einfo.fcgi?db=snp you can see that you can query the SNP for a given organism using the [ORGN] entrez field
http://www.ncbi.nlm.nih.gov/snp?db=snp&cmd=search&term=%22Apis+Mellifera%22[ORG]
or use ncbi elinks with the snp_taxonomy relationship.
Same for http://eutils.ncbi.nlm.nih.gov/entrez/eutils/einfo.fcgi?db=taxonomy: there is a relation named taxonomysnpexp "Snp records associated with taxonomy record (exploded for higher taxa)"
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